TCGA
IDcancer typecancer ProgramProjectDisease typegenderAge at diagnosisvital statusdays to deathracesnvFusionCNVvcfraw data
绿色
clinvar
1.Disease2.Chrosome3.Gene.Start4.Gene.Stop5.Chain6.Var.Assembly7.Var.Start8.Var.Stop9.Reference10.Alternative11.CDS12.Type13.Consequence14.Significance15.Status16.Title17.Sig18.Symbol19.vcfpostion20.vcfref21.vcfalt
主表
病人诊断信息
IDClassification of TumorAlcohol IntensityAge at DiagnosisDays to BirthDays to DeathDays to Last FollowupDays to Last Known Disease StatusDays to RecurrenceLast Known Disease StatusMorphologyPrimary DiagnosisPrior MalignancyProgression or RecurrenceSite of Resection or BiopsyTissue or Organ of OriginTumor GradeTumor StageVital StatusCreatedUpdated
药物数据库
1.药品通用名(Aldesleukin)2.中文名(重组人白介素-2)3.商品名(Proleukin)4.作用靶点(IL2RA，IL2RB)5.适用疾病(黑色素瘤，肾癌)6.应用条件(转移性肾细胞癌(mRCC)成人患者...)7.作用机制(该品的生物活..)8.FDA最新说明书9.研发代码10.上市时间11.原研商12.药物类型13.适用癌种14.备注
临床库(明确)
ICGC
icgc_specimen_idproject_codestudy_specimen_involved_insubmitted_specimen_idicgc_donor_idsubmitted_donor_idspecimen_typespecimen_type_otherspecimen_intervalspecimen_donor_treatment_typespecimen_donor_treatment_type_otherspecimen_processingspecimen_processing_otherspecimen_storagespecimen_storage_othertumour_confirmedspecimen_biobankspecimen_biobank_idspecimen_availabletumour_histological_typetumour_grading_systemtumour_gradetumour_grade_supplementaltumour_stage_systemtumour_stagetumour_stage_supplementaldigital_image_of_stained_sectionpercentage_cellularitylevel_of_cellularity
数据挖掘库（原始样本数据）
COSMIC
1.Gene name2.Accession Number3.Gene CDS length4.HGNC ID5.Sample name6.ID_sample7.ID_tumour8.Primary site9.Site subtype 1Site subtype 210.Site subtype 311.Primary histology12.Histology subtype 113.Histology subtype 214.Histology subtype 315.Genome-wide screen16.Mutation ID17.Mutation CDS18.Mutation AA19.Mutation Description20.Mutation zygosity21.LOH22.GRCh23.Mutation genome position24.Mutation strand25.SNP26.FATHMM prediction27.FATHMM score28.Mutation somatic status29.Pubmed_PMID30.ID_STUDY31.Sample source32.Tumour origin33.Age
vcf突变信息
CHROMPOSIDREFALTQUALFILTERINFO
主要突变库
自建数据库
